- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | caeJap1-24 | mir-31 | sme-miR-31a | 22/23 | chrUn | + | 4-26 | 88945988-88946061 | 0.952296 | Ortholog | 40/60 | 1/107 |
2 | caeJap1-24 | mir-31 | ame-miR-31a | 21/22 | chrUn | + | 5-26 | 88945988-88946061 | 0.966643 | Ortholog | 40/60 | 1/107 |
3 | caeJap1-24 | mir-31 | bfl-miR-31 | 21/23 | chrUn | + | 5-25 | 88945988-88946061 | 0.964511 | Ortholog | 40/60 | 1/107 |
4 | caeJap1-12 | mir-595 | hsa-miR-595 | 19/21 | chrUn | + | 6-26 | 20802364-20802438 | 0.995655 | Ortholog | 2/3 | 1/3 |
5 | caeJap1-1 | mir-251 | cel-miR-251 | 23/24 | chrUn | + | 6-29 | 181839-181909 | 0.965084 | Ortholog | 2/5 | 1/6 |
6 | caeJap1-30 | mir-71 | cel-miR-71 | 19/19 | chrUn | + | 12-30 | 134164466-134164545 | 0.999125 | Ortholog | 13/17 | 1/25 |
7 | caeJap1-30 | mir-71 | spu-miR-71 | 21/23 | chrUn | + | 14-34 | 134164464-134164546 | 0.998654 | Ortholog | 13/17 | 1/25 |
8 | caeJap1-10 | mir-34 | cin-miR-34 | 20/22 | chrUn | + | 16-37 | 18910373-18910457 | 0.998959 | Ortholog | 45/67 | 1/144 |
9 | caeJap1-2 | mir-1306 | mmu-miR-1306 | 19/21 | chrUn | + | 16-36 | 3412993-3413077 | 0.915423 | Ortholog | 6/27 | 1/28 |
10 | caeJap1-3 | lin-4 | cel-lin-4 | 21/21 | chrUn | + | 17-37 | 4235948-4236033 | 0.993408 | Ortholog | 3/5 | 1/5 |
11 | caeJap1-10 | mir-34 | aga-miR-34 | 19/20 | chrUn | + | 17-35 | 18910373-18910457 | 0.99778 | Ortholog | 45/67 | 1/144 |
12 | caeJap1-10 | mir-34 | spu-miR-34 | 20/22 | chrUn | + | 18-38 | 18910372-18910458 | 0.996783 | Ortholog | 45/67 | 1/144 |
13 | caeJap1-8 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | + | 19-40 | 14229611-14229698 | 0.995392 | Ortholog | 1/6 | 9/21 |
14 | caeJap1-28 | mir-1831 | cel-miR-1831 | 20/22 | chrUn | + | 19-38 | 125685897-125685983 | 0.992208 | Ortholog | 1/6 | 9/21 |
15 | caeJap1-24 | mir-31 | cap-miR-31 | 21/21 | chrUn | + | 25-45 | 88945967-88946060 | 0.884417 | Ortholog | 40/60 | 1/107 |
16 | caeJap1-24 | mir-31 | cfa-miR-31 | 21/23 | chrUn | + | 25-46 | 88945967-88946060 | 0.843491 | Ortholog | 40/60 | 1/107 |
17 | caeJap1-23 | mir-253 | cel-miR-253 | 19/21 | chrUn | + | 26-44 | 80098504-80098593 | 0.838323 | Ortholog | 2/6 | 2/8 |
18 | caeJap1-24 | mir-31 | csa-miR-31 | 20/21 | chrUn | + | 26-45 | 88945967-88946060 | 0.905353 | Ortholog | 40/60 | 1/107 |
19 | caeJap1-18 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | + | 41-62 | 40371573-40371681 | 0.933625 | Ortholog | 1/6 | 9/21 |
20 | caeJap1-9 | mir-87 | aga-miR-87 | 19/21 | chrUn | + | 49-69 | 17231998-17232073 | 0.998136 | Ortholog | 21/27 | 1/39 |
21 | caeJap1-21 | mir-281 | bmo-miR-281 | 20/22 | chrUn | + | 49-69 | 55670838-55670911 | 0.996909 | Ortholog | 25/33 | 3/68 |
22 | caeJap1-4 | mir-73 | cbr-miR-73 | 23/23 | chrUn | + | 50-72 | 6831563-6831637 | 0.972128 | Ortholog | 2/4 | 1/4 |
23 | caeJap1-9 | mir-87 | cbr-miR-87 | 20/20 | chrUn | + | 50-69 | 17231998-17232073 | 0.998798 | Ortholog | 21/27 | 1/39 |
24 | caeJap1-29 | mir-60 | cbr-miR-60 | 22/23 | chrUn | + | 50-72 | 130421854-130421939 | 0.999588 | Ortholog | 2/4 | 1/5 |
25 | caeJap1-21 | mir-281 | tca-miR-281 | 19/21 | chrUn | + | 50-69 | 55670838-55670911 | 0.998484 | Ortholog | 25/33 | 3/68 |
26 | caeJap1-9 | mir-87 | tca-miR-87 | 21/21 | chrUn | + | 50-70 | 17231998-17232073 | 0.998136 | Ortholog | 21/27 | 1/39 |
27 | caeJap1-9 | mir-87 | cel-miR-87 | 22/22 | chrUn | + | 50-71 | 17231998-17232073 | 0.996794 | Ortholog | 21/27 | 1/39 |
28 | caeJap1-21 | mir-47 | cel-miR-47 | 21/22 | chrUn | + | 50-71 | 55670838-55670911 | 0.996309 | Ortholog | 2/5 | 3/10 |
29 | caeJap1-16 | mir-85 | cbr-miR-85 | 23/24 | chrUn | + | 50-73 | 39527007-39527081 | 0.939689 | Ortholog | 2/3 | 1/4 |
30 | caeJap1-5 | mir-74 | cel-miR-74 | 21/22 | chrUn | + | 51-71 | 6831868-6831946 | 0.980899 | Ortholog | 2/5 | 1/7 |
31 | caeJap1-13 | mir-62 | cel-miR-62 | 22/22 | chrUn | + | 51-72 | 27040332-27040412 | 0.99664 | Ortholog | 2/5 | 1/6 |
32 | caeJap1-9 | mir-87 | sme-miR-87a | 18/20 | chrUn | + | 51-69 | 17231998-17232073 | 0.999199 | Ortholog | 21/27 | 1/39 |
33 | caeJap1-22 | mir-789 | cel-miR-789 | 21/23 | chrUn | + | 51-73 | 75784951-75785024 | 0.976245 | Ortholog | 2/5 | 2/11 |
34 | caeJap1-20 | mir-253 | cel-miR-253 | 21/21 | chrUn | + | 51-71 | 55160348-55160425 | 0.991271 | Ortholog | 2/6 | 2/8 |
35 | caeJap1-14 | mir-47 | cel-miR-47 | 22/22 | chrUn | + | 51-72 | 36289936-36290014 | 0.997043 | Ortholog | 2/5 | 3/10 |
36 | caeJap1-26 | mir-44 | cel-miR-44 | 21/21 | chrUn | + | 51-71 | 98930678-98930750 | 0.982077 | Ortholog | 2/5 | 2/11 |
37 | caeJap1-27 | mir-1 | sko-miR-1 | 20/22 | chrUn | + | 51-71 | 124179233-124179303 | 0.929928 | Ortholog | 41/61 | 1/166 |
38 | caeJap1-19 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | + | 51-72 | 40384430-40384517 | 0.971357 | Ortholog | 1/6 | 9/21 |
39 | caeJap1-9 | mir-87 | bmo-miR-87 | 19/21 | chrUn | + | 51-70 | 17231998-17232073 | 0.998798 | Ortholog | 21/27 | 1/39 |
40 | caeJap1-7 | mir-75 | cbr-miR-75 | 20/22 | chrUn | + | 51-72 | 6839265-6839351 | 0.967962 | Ortholog | 2/5 | 1/5 |
41 | caeJap1-14 | mir-281 | bmo-miR-281 | 20/22 | chrUn | + | 51-72 | 36289934-36290016 | 0.997906 | Ortholog | 25/33 | 3/68 |
42 | caeJap1-17 | mir-77 | cel-miR-77 | 21/22 | chrUn | + | 51-72 | 40079844-40079920 | 0.997125 | Ortholog | 2/5 | 1/8 |
43 | caeJap1-5 | mir-74 | cbr-miR-74 | 20/22 | chrUn | + | 52-71 | 6831867-6831947 | 0.9923 | Ortholog | 2/5 | 1/7 |
44 | caeJap1-36 | mir-57 | cel-miR-57 | 24/24 | chrUn | - | 8-31 | 29105288-29105367 | 0.958682 | Ortholog | 2/4 | 1/4 |
45 | caeJap1-43 | mir-51 | cbr-miR-51 | 21/23 | chrUn | - | 8-30 | 59536111-59536188 | 0.848873 | Ortholog | 2/4 | 1/5 |
46 | caeJap1-42 | mir-244 | cel-miR-244 | 24/24 | chrUn | - | 8-31 | 44620228-44620306 | 0.996682 | Ortholog | 2/5 | 1/6 |
47 | caeJap1-44 | mir-239 | cbr-miR-239a | 21/23 | chrUn | - | 10-32 | 61791089-61791169 | 0.999878 | Ortholog | 2/5 | 1/8 |
48 | caeJap1-53 | mir-355 | cel-miR-355 | 21/21 | chrUn | - | 10-30 | 90387997-90388071 | 0.997907 | Ortholog | 2/8 | 1/9 |
49 | caeJap1-39 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | - | 11-32 | 40372753-40372834 | 0.920724 | Ortholog | 1/6 | 9/21 |
50 | caeJap1-40 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | - | 11-32 | 40385406-40385487 | 0.920724 | Ortholog | 1/6 | 9/21 |
51 | caeJap1-34 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | - | 19-40 | 14228934-14229022 | 0.985225 | Ortholog | 1/6 | 9/21 |
52 | caeJap1-52 | mir-297 | mml-miR-297 | 18/20 | chrUn | - | 20-39 | 81086393-81086481 | 0.931638 | Ortholog | 5/47 | 1/705 |
53 | caeJap1-54 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | - | 22-43 | 92585770-92585862 | 0.962047 | Ortholog | 1/6 | 9/21 |
54 | caeJap1-41 | mir-1831 | cel-miR-1831 | 22/22 | chrUn | - | 24-45 | 43909283-43909377 | 0.98959 | Ortholog | 1/6 | 9/21 |
55 | caeJap1-57 | mir-35 | cbr-miR-35 | 21/22 | chrUn | - | 46-67 | 117591236-117591307 | 0.968218 | Ortholog | 2/3 | 1/5 |
56 | caeJap1-45 | mir-47 | cel-miR-47 | 21/22 | chrUn | - | 47-68 | 65131769-65131836 | 0.998656 | Ortholog | 2/5 | 3/10 |
57 | caeJap1-32 | mir-90 | cel-miR-90 | 23/23 | chrUn | - | 48-70 | 4612036-4612108 | 0.995417 | Ortholog | 2/3 | 1/3 |
58 | caeJap1-49 | mir-54 | cel-miR-54 | 24/24 | chrUn | - | 48-71 | 66592933-66593009 | 0.993117 | Ortholog | 1/2 | 1/2 |
59 | caeJap1-32 | mir-90 | cbr-miR-90 | 22/22 | chrUn | - | 48-69 | 4612036-4612108 | 0.994721 | Ortholog | 2/3 | 1/3 |
60 | caeJap1-47 | mir-56 | cel-miR-56 | 20/22 | chrUn | - | 48-69 | 66592639-66592718 | 0.998331 | Ortholog | 1/3 | 1/3 |
61 | caeJap1-51 | mir-79 | cel-miR-79 | 22/22 | chrUn | - | 49-70 | 79311353-79311429 | 0.997979 | Ortholog | 22/28 | 1/45 |
62 | caeJap1-48 | mir-55 | cel-miR-55 | 22/23 | chrUn | - | 49-71 | 66592805-66592880 | 0.986563 | Ortholog | 2/4 | 1/5 |
63 | caeJap1-51 | mir-79 | spu-miR-79 | 20/22 | chrUn | - | 49-68 | 79311353-79311429 | 0.996777 | Ortholog | 22/28 | 1/45 |
64 | caeJap1-60 | mir-38 | cel-miR-38 | 22/22 | chrUn | - | 49-70 | 117591729-117591806 | 0.938983 | Ortholog | 2/3 | 1/3 |
65 | caeJap1-61 | mir-37 | cel-miR-37 | 22/22 | chrUn | - | 49-70 | 117591824-117591897 | 0.863691 | Ortholog | 1/2 | 1/2 |
66 | caeJap1-33 | mir-82 | cel-miR-82 | 22/22 | chrUn | - | 49-70 | 6900605-6900683 | 0.996977 | Ortholog | 2/5 | 1/7 |
67 | caeJap1-45 | mir-281 | bmo-miR-281 | 20/22 | chrUn | - | 49-69 | 65131766-65131839 | 0.999134 | Ortholog | 25/33 | 3/68 |
68 | caeJap1-50 | mir-789 | cel-miR-789 | 23/23 | chrUn | - | 49-71 | 75784951-75785022 | 0.994608 | Ortholog | 2/5 | 2/11 |
69 | caeJap1-37 | mir-230 | cel-miR-230 | 23/23 | chrUn | - | 49-71 | 38524807-38524880 | 0.970823 | Ortholog | 2/5 | 1/6 |
70 | caeJap1-59 | mir-40 | cbr-miR-40 | 20/22 | chrUn | - | 49-70 | 117591565-117591643 | 0.994156 | Ortholog | 2/3 | 1/3 |
71 | caeJap1-58 | mir-41 | cbr-miR-41 | 19/21 | chrUn | - | 49-67 | 117591344-117591421 | 0.996913 | Ortholog | 2/4 | 1/4 |
72 | caeJap1-51 | mir-79 | ame-miR-79 | 19/21 | chrUn | - | 50-69 | 79311353-79311429 | 0.996604 | Ortholog | 22/28 | 1/45 |
73 | caeJap1-55 | mir-44 | cel-miR-44 | 21/21 | chrUn | - | 50-70 | 98919024-98919098 | 0.994904 | Ortholog | 2/5 | 2/11 |
74 | caeJap1-51 | mir-79 | cap-miR-79 | 21/22 | chrUn | - | 50-70 | 79311353-79311429 | 0.998232 | Ortholog | 22/28 | 1/45 |
75 | caeJap1-56 | mir-83 | cel-miR-83 | 21/22 | chrUn | - | 50-70 | 113084178-113084251 | 0.930214 | Ortholog | 2/4 | 1/4 |
76 | caeJap1-56 | mir-83 | cbr-miR-83 | 20/22 | chrUn | - | 50-69 | 113084178-113084251 | 0.939258 | Ortholog | 2/4 | 1/4 |
77 | caeJap1-45 | mir-281 | tca-miR-281 | 19/21 | chrUn | - | 50-69 | 65131766-65131839 | 0.999544 | Ortholog | 25/33 | 3/68 |
78 | caeJap1-37 | mir-230 | cbr-miR-230 | 21/23 | chrUn | - | 50-70 | 38524806-38524881 | 0.988968 | Ortholog | 2/5 | 1/6 |
79 | caeJap1-35 | mir-1638 | gga-miR-1638 | 19/20 | chrUn | - | 50-69 | 27355257-27355348 | 0.815694 | Ortholog | 1/23 | 1/58 |
Total | 79 record(s). |